Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Kdm2b

Cell type

Cell type Class
Blood
Cell type
Thymocytes
MeSH Description
HEMATOPOIETIC PROGENITOR CELLS that have migrated to the THYMUS where they differentiate into T-LYMPHOCYTES. Thymocytes are classified into maturational stages based on the expression of CELL SURFACE ANTIGENS.

Attributes by original data submitter

Sample

sample_name
3xFlag-KDM2B_thymocytes
strain
C57BL6/NCR
tissue_type
Thymus

Sequenced DNA Library

library_name
Input_H2AK119ub1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
29370599
Reads aligned (%)
96.9
Duplicates removed (%)
13.2
Number of peaks
262 (qval < 1E-05)

mm9

Number of total reads
29370599
Reads aligned (%)
96.7
Duplicates removed (%)
13.1
Number of peaks
266 (qval < 1E-05)

Base call quality data from DBCLS SRA