Antigen

Antigen Class

ATAC-Seq

Antigen

ATAC-Seq

Cell type

Cell type Class

Blood

Cell type

Hematopoietic Stem Cells

MeSH Description

Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Sample

sample_name

Vav-Cre_HSC_rep.2

age

12 weeks

cell_type

hematopoietic stem cell

replicate

biological replicate 2

strain

C57BL6/NCR

tissue_type

bone marrow

Sequenced DNA Library

library_name

Vav-Cre_HSC_ATAC-seq_rep.2

library_strategy

ATAC-seq

library_source

GENOMIC

library_selection

other

Sequencing Platform

instrument_model

Illumina HiSeq 1500

mm10

Number of total reads

23491303

Reads aligned (%)

98.2

Duplicates removed (%)

74.1

Number of peaks

16268 (qval < 1E-05)

mm9

Number of total reads

23491303

Reads aligned (%)

98.2

Duplicates removed (%)

74.2

Number of peaks

16279 (qval < 1E-05)