DRX133691
Illumina HiSeq 1500 sequencing of SAMD00129495

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
LSK cells
NA
NA

Attributes by original data submitter

Sample

sample_name
exp321_1_LSK_3M_WT
cell_type
LSK cell
replicate
4
strain
C57BL6/NCR
treatment
tamoxifen for 3Mo

Sequenced DNA Library

library_name
exp321_1_LSK_3M_WT_input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
14541897
Reads aligned (%)
95.5
Duplicates removed (%)
15.2
Number of peaks
224 (qval < 1E-05)

mm9

Number of total reads
14541897
Reads aligned (%)
95.2
Duplicates removed (%)
15.2
Number of peaks
222 (qval < 1E-05)

Base call quality data from DBCLS SRA