DRX118992
NextSeq 500 paired end sequencing of input

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Embryo
Cell type
Primordial germ cells
NA
NA

Attributes by original data submitter

Sample

sample_name
e13_f
cell_type
primordial germ cell
dev_stage
e13.5
sex
female

Sequenced DNA Library

library_name
ChIP_e13.5_female_input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
22659311
Reads aligned (%)
97.7
Duplicates removed (%)
10.2
Number of peaks
104 (qval < 1E-05)

mm9

Number of total reads
22659311
Reads aligned (%)
97.6
Duplicates removed (%)
10.4
Number of peaks
97 (qval < 1E-05)

Base call quality data from DBCLS SRA