DRX118986
NextSeq 500 paired end sequencing of SAMD00109225 rep1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
ATAC-Seq
Antigen
ATAC-Seq

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

sample_name
P1_m_ATAC
dev_stage
P1
sex
male

Sequenced DNA Library

library_name
ATAC_P1s_rep1
library_strategy
ATAC-seq
library_source
GENOMIC
library_selection
other

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
55618561
Reads aligned (%)
97.1
Duplicates removed (%)
38.0
Number of peaks
16374 (qval < 1E-05)

mm9

Number of total reads
55618561
Reads aligned (%)
97.0
Duplicates removed (%)
38.1
Number of peaks
16457 (qval < 1E-05)

Base call quality data from DBCLS SRA