DRX118976
NextSeq 500 paired end sequencing of SAMD00109220 rep1

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9me2

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

sample_name
P1_m_9-2
antibody
H3K9me2
dev_stage
P1
sex
male

Sequenced DNA Library

library_name
ChIP_P1s_H3K9me2_rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
23501256
Reads aligned (%)
96.4
Duplicates removed (%)
23.2
Number of peaks
148 (qval < 1E-05)

mm9

Number of total reads
23501256
Reads aligned (%)
96.2
Duplicates removed (%)
23.5
Number of peaks
140 (qval < 1E-05)

Base call quality data from DBCLS SRA