DRX118961
NextSeq 500 paired end sequencing of SAMD00109212 rep2

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

sample_name
P1_f_27ac
antibody
H3K27ac
dev_stage
P1
sex
female

Sequenced DNA Library

library_name
ChIP_P1o_H3K27ac_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
36888200
Reads aligned (%)
98.1
Duplicates removed (%)
25.6
Number of peaks
13387 (qval < 1E-05)

mm9

Number of total reads
36888200
Reads aligned (%)
98.1
Duplicates removed (%)
25.6
Number of peaks
13346 (qval < 1E-05)

Base call quality data from DBCLS SRA