Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Blood
Cell type
Dendritic Cells
MeSH Description
ANTIGEN-PRESENTING CELLS of dendritic cell morphology found in the LYMPH NODES and other lymphoid tissues.

Attributes by original data submitter

Sample

sample_name
WT_LPS2h_H3K4me3_IP
antibody
H3K4me3
cell_type
bone marrow-derived dendritic cell
genotype
wild-type

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

mm10

Number of total reads
23310833
Reads aligned (%)
56.3
Duplicates removed (%)
20.8
Number of peaks
18917 (qval < 1E-05)

mm9

Number of total reads
23310833
Reads aligned (%)
56.2
Duplicates removed (%)
20.9
Number of peaks
18991 (qval < 1E-05)

Base call quality data from DBCLS SRA