Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Bone
Cell type
Osteoclasts
MeSH Description
A large multinuclear cell associated with the BONE RESORPTION. An odontoclast, also called cementoclast, is cytomorphologically the same as an osteoclast and is involved in CEMENTUM resorption.

Attributes by original data submitter

Sample

sample_name
OC_H3K4me3_ChIP
cell_type
osteoclast
sex
male
strain
ddY
tissue_type
bone marrow

Sequenced DNA Library

library_name
OC_H3K4me3_ChIP-seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
35170179
Reads aligned (%)
94.0
Duplicates removed (%)
52.1
Number of peaks
15458 (qval < 1E-05)

mm9

Number of total reads
35170179
Reads aligned (%)
93.4
Duplicates removed (%)
52.0
Number of peaks
15533 (qval < 1E-05)

Base call quality data from DBCLS SRA