DRX100832
Illumina Genome Analyzer IIx sequencing of SAMD00097617

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
HL-60
Primary Tissue
Blood
Tissue Diagnosis
Leukemia

Attributes by original data submitter

Sample

sample_name
HL60_Input_shScramble_0h
cell_line
HL60

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
34561119
Reads aligned (%)
96.8
Duplicates removed (%)
2.9
Number of peaks
1216 (qval < 1E-05)

hg19

Number of total reads
34561119
Reads aligned (%)
95.9
Duplicates removed (%)
3.8
Number of peaks
1092 (qval < 1E-05)

Base call quality data from DBCLS SRA