Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
POLH

Cell type

Cell type Class
Digestive tract
Cell type
HCT 116
Primary Tissue
Colon
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

sample_name
ctrl-PolH
cell_line
HCT116

Sequenced DNA Library

library_name
ChIP-ctrl-PolH
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 3000

hg19

Number of total reads
24445684
Reads aligned (%)
89.9
Duplicates removed (%)
8.2
Number of peaks
490 (qval < 1E-05)

hg38

Number of total reads
24445684
Reads aligned (%)
91.4
Duplicates removed (%)
7.5
Number of peaks
327 (qval < 1E-05)

Base call quality data from DBCLS SRA