DRX083361
Illumina HiSeq 2500 sequencing of SAMD00076842

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Irf8

Cell type

Cell type Class
Blood
Cell type
Macrophage-dendritic cell progenitor
NA
NA

Attributes by original data submitter

Sample

sample_name
WT_MDP_IRF8_ChIP-seq_rep2
replicate
biological replicate 2

Sequenced DNA Library

library_name
WT_MDP_IRF8_ChIP-seq_rep2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Illumina TruSeq ChIP Sample Prep Kit

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
39637940
Reads aligned (%)
75.3
Duplicates removed (%)
65.0
Number of peaks
2740 (qval < 1E-05)

mm9

Number of total reads
39637940
Reads aligned (%)
75.1
Duplicates removed (%)
65.2
Number of peaks
2687 (qval < 1E-05)

Base call quality data from DBCLS SRA