Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Cardiovascular

Cell type

Endocardial cells

NA

NA

Sample

sample_name

DRS014282

age

19

biomaterial_provider

Lonza Walkersville, Inc (Walkersville, MD)

biomaterial_type

Primary Cell

catalog number

FC-0077

cause of death

Anoxia

cell ontology

endocardial cell

cell ontology uri

http://purl.obolibrary.org/obo/CL_0002350

cell type abbreviation

HENDC

cell_type

Human Endocardial Cells

collection_date

2013-05-01

donor_id

JTK012

ethnicity

African american

health_state

dead

ihec ref

JTK012

label

IHEC23

lot number

3233

sample_type

Primary Cell

sex

female

tissue_type

the endothelium of blood vessels

total cell count

940000

total cell count unit

cell per mili-liter

viability (tripan blue exclusion)

97%

Sequenced DNA Library

library_name

WadaLab-IHEC23-E1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Sequencing library was constructed following the Illumina protocol

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

51004069

Reads aligned (%)

98.7

Duplicates removed (%)

5.5

Number of peaks

2601 (qval < 1E-05)

hg19

Number of total reads

51004069

Reads aligned (%)

97.3

Duplicates removed (%)

8.3

Number of peaks

1819 (qval < 1E-05)