DRX066947
Illumina HiSeq 1500 sequencing of SAMD00064334

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3.3

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
HeLa-H3.3-GFP
cell_line
Hela

Sequenced DNA Library

library_name
HeLa-H3.3-input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
48283859
Reads aligned (%)
99.2
Duplicates removed (%)
5.0
Number of peaks
691 (qval < 1E-05)

hg19

Number of total reads
48283859
Reads aligned (%)
98.5
Duplicates removed (%)
6.7
Number of peaks
655 (qval < 1E-05)

Base call quality data from DBCLS SRA