DRX066942
Illumina HiSeq 1500 sequencing of SAMD00064331

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3.6

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
HeLa-H3.6-GFP
cell_line
Hela

Sequenced DNA Library

library_name
HeLa-H3.6-GFP_rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
53099877
Reads aligned (%)
99.4
Duplicates removed (%)
12.8
Number of peaks
741 (qval < 1E-05)

hg19

Number of total reads
53099877
Reads aligned (%)
98.6
Duplicates removed (%)
14.6
Number of peaks
685 (qval < 1E-05)

Base call quality data from DBCLS SRA