Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Neural

Cell type

Brain

MeSH Description

The part of CENTRAL NERVOUS SYSTEM that is contained within the skull (CRANIUM). Arising from the NEURAL TUBE, the embryonic brain is comprised of three major parts including PROSENCEPHALON (the forebrain); MESENCEPHALON (the midbrain); and RHOMBENCEPHALON (the hindbrain). The developed brain consists of CEREBRUM; CEREBELLUM; and other structures in the BRAIN STEM.

Sample

sample_name

Mouse_Adult_WildType

strain

C57/BL6J

tissue_type

Whole brain

age

10-weeks-old

Sequenced DNA Library

library_name

ChIP-seq_Adult_WildType_mouse_Whole-Brain_CHD8_input

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 1500

mm10

Number of total reads

38751749

Reads aligned (%)

98.6

Duplicates removed (%)

30.5

Number of peaks

282 (qval < 1E-05)

mm9

Number of total reads

38751749

Reads aligned (%)

98.5

Duplicates removed (%)

30.6

Number of peaks

285 (qval < 1E-05)