DRX061050
Illumina HiSeq 1500 sequencing of SAMD00057617

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Embryo
Cell type
Embryonic brains
NA
NA

Attributes by original data submitter

Sample

sample_name
Mouse_E14.5_CHD8hetero
strain
C57/BL6J
tissue_type
Whole brain
age
Embryonic day 14.5

Sequenced DNA Library

library_name
ChIP-seq_E14.5_CHD8hetero_mouse_Whole-Brain_CHD8_input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
37508518
Reads aligned (%)
98.6
Duplicates removed (%)
25.7
Number of peaks
2469 (qval < 1E-05)

mm9

Number of total reads
37508518
Reads aligned (%)
98.5
Duplicates removed (%)
25.7
Number of peaks
2450 (qval < 1E-05)

Base call quality data from DBCLS SRA