DRX059949
Illumina HiSeq 1000 sequencing of SAMD00055993

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K36me3

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

sample_name
H3K36me3_LPS0.5h_IP

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
29911739
Reads aligned (%)
95.7
Duplicates removed (%)
20.2
Number of peaks
284 (qval < 1E-05)

mm9

Number of total reads
29911739
Reads aligned (%)
95.4
Duplicates removed (%)
20.1
Number of peaks
340 (qval < 1E-05)

Base call quality data from DBCLS SRA