DRX059831
Illumina HiSeq 1000 sequencing of SAMD00055875

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

sample_name
H3K4me1_LPS3h_IP

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
48993900
Reads aligned (%)
94.7
Duplicates removed (%)
7.5
Number of peaks
42232 (qval < 1E-05)

mm9

Number of total reads
48993900
Reads aligned (%)
94.6
Duplicates removed (%)
7.5
Number of peaks
42203 (qval < 1E-05)

Base call quality data from DBCLS SRA