DRX049481
Illumina HiSeq 2500 sequencing of SAMD00046696

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Spi1

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

sample_name
WT_Neu_PU.1

Sequenced DNA Library

library_name
WT_Neu_PU.1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
illumina TruSeq ChIP Sample Prep Kit

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
32117699
Reads aligned (%)
69.7
Duplicates removed (%)
38.2
Number of peaks
10898 (qval < 1E-05)

mm9

Number of total reads
32117699
Reads aligned (%)
69.5
Duplicates removed (%)
38.3
Number of peaks
10935 (qval < 1E-05)

Base call quality data from DBCLS SRA