DRX049468
Illumina HiSeq 2500 sequencing of SAMD00046687

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Unclassified
Cell type
Unclassified
NA
NA

Attributes by original data submitter

Sample

sample_name
WT_Mo_H3K4me3

Sequenced DNA Library

library_name
WT_Mo_H3K4me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
illumina TruSeq ChIP Sample Prep Kit

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
41380473
Reads aligned (%)
92.5
Duplicates removed (%)
26.8
Number of peaks
18608 (qval < 1E-05)

mm9

Number of total reads
41380473
Reads aligned (%)
92.1
Duplicates removed (%)
26.7
Number of peaks
18700 (qval < 1E-05)

Base call quality data from DBCLS SRA