DRX049451
Illumina HiSeq 2500 sequencing of SAMD00046699

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Blood
Cell type
Common monocyte progenitors
NA
NA

Attributes by original data submitter

Sample

sample_name
WT_cMoP_H3K4me1

Sequenced DNA Library

library_name
?WT_cMoP_H3K4me1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
illumina TruSeq ChIP Sample Prep Kit

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
30788843
Reads aligned (%)
94.7
Duplicates removed (%)
20.2
Number of peaks
36992 (qval < 1E-05)

mm9

Number of total reads
30788843
Reads aligned (%)
94.5
Duplicates removed (%)
20.3
Number of peaks
36905 (qval < 1E-05)

Base call quality data from DBCLS SRA