Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9ac

Cell type

Cell type Class
Blood
Cell type
T cells
NA
NA

Attributes by original data submitter

Sample

sample_name
009_ED_ChIP_H3K9ac_1
collection_date
2015-03-10
cell_line
ED cells
cell_type
T cell
replicate
biological replicate 1

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
NextSeq 500

hg38

Number of total reads
38297338
Reads aligned (%)
90.7
Duplicates removed (%)
12.8
Number of peaks
23455 (qval < 1E-05)

hg19

Number of total reads
38297338
Reads aligned (%)
89.9
Duplicates removed (%)
14.0
Number of peaks
23119 (qval < 1E-05)

Base call quality data from DBCLS SRA