DRX042312
Illumina HiSeq 2500 paired end sequencing of SAMD00041761

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Embryonic fibroblast
Cell type
NIH/3T3
Primary Tissue
Embryo
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

sample_name
ID3
cell_line
NIH3T3

Sequenced DNA Library

library_name
NIH-Vec-K27me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
200642936
Reads aligned (%)
98.6
Duplicates removed (%)
29.6
Number of peaks
6639 (qval < 1E-05)

mm9

Number of total reads
200642936
Reads aligned (%)
98.5
Duplicates removed (%)
29.7
Number of peaks
6602 (qval < 1E-05)

Base call quality data from DBCLS SRA