DRX041639
Illumina HiSeq 2500 paired end sequencing of SAMD00041003

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27ac

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

sample_name
K562_ChIP-Seq_H3K27ac
biomaterial_provider
ATCC
cell_line
K562
disease
chronic myelogenous leukemia

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
31244144
Reads aligned (%)
91.8
Duplicates removed (%)
4.9
Number of peaks
20305 (qval < 1E-05)

hg19

Number of total reads
31244144
Reads aligned (%)
91.3
Duplicates removed (%)
5.0
Number of peaks
19774 (qval < 1E-05)

Base call quality data from DBCLS SRA