DRX040796
Illumina HiSeq 1500 sequencing of SAMD00019348

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

sample_name
mouse ES EB5
strain
129/Ola
cell_line
EB5
cell_type
ES

Sequenced DNA Library

library_name
ChIP-Seq EB5-WT H3.3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
31289777
Reads aligned (%)
97.5
Duplicates removed (%)
19.5
Number of peaks
472 (qval < 1E-05)

mm9

Number of total reads
31289777
Reads aligned (%)
97.3
Duplicates removed (%)
19.6
Number of peaks
459 (qval < 1E-05)

Base call quality data from DBCLS SRA