DRX033350
Illumina HiSeq 1500 sequencing of SAMD00019683

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Embryo
Cell type
Embryonic liver
NA
NA

Attributes by original data submitter

Sample

sample_name
E15.5 Fetal liver LSK
dev_stage
fetus
genotype
wildtype
strain
C57BL6/NCR
tissue_type
liver

Sequenced DNA Library

library_name
E15.5 Fetal liver LSK Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
78954570
Reads aligned (%)
96.3
Duplicates removed (%)
15.1
Number of peaks
784 (qval < 1E-05)

mm9

Number of total reads
78954570
Reads aligned (%)
96.0
Duplicates removed (%)
15.0
Number of peaks
895 (qval < 1E-05)

Base call quality data from DBCLS SRA