DRX030662
Illumina HiSeq 1500 sequencing of SAMD00029142

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

sample_name
Nup98HoxA9 ES
strain
129/Ola
cell_line
EB3-derived

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
42405986
Reads aligned (%)
98.3
Duplicates removed (%)
51.4
Number of peaks
217 (qval < 1E-05)

mm9

Number of total reads
42405986
Reads aligned (%)
98.2
Duplicates removed (%)
51.5
Number of peaks
211 (qval < 1E-05)

Base call quality data from DBCLS SRA