DRX028573
Illumina HiSeq 2500 sequencing of SAMD00027675

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

sample_name
3_HBZ_isotype [ChIPseq]
cell_type
CD4+ T cell

Sequenced DNA Library

library_name
3_HBZ_isotype [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
16501182
Reads aligned (%)
81.5
Duplicates removed (%)
37.7
Number of peaks
464 (qval < 1E-05)

mm9

Number of total reads
16501182
Reads aligned (%)
81.4
Duplicates removed (%)
38.0
Number of peaks
508 (qval < 1E-05)

Base call quality data from DBCLS SRA