DRX028569
Illumina HiSeq 2500 sequencing of SAMD00027671

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K18ac

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

sample_name
3_HBZ_H3K18 [ChIPseq]
cell_type
CD4+ T cell

Sequenced DNA Library

library_name
3_HBZ_H3K18 [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
21194969
Reads aligned (%)
97.7
Duplicates removed (%)
14.1
Number of peaks
18440 (qval < 1E-05)

mm9

Number of total reads
21194969
Reads aligned (%)
97.6
Duplicates removed (%)
14.2
Number of peaks
18505 (qval < 1E-05)

Base call quality data from DBCLS SRA