DRX025974
Illumina HiSeq 2500 sequencing of SAMD00024360

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Blood
Cell type
Macrophage-dendritic cell progenitor
NA
NA

Attributes by original data submitter

Sample

sample_name
WT_MDP_H3K4me1_exp1

Sequenced DNA Library

library_name
WT_MDP_H3K4me1_exp1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
18996098
Reads aligned (%)
95.5
Duplicates removed (%)
8.8
Number of peaks
7019 (qval < 1E-05)

mm9

Number of total reads
18996098
Reads aligned (%)
95.4
Duplicates removed (%)
9.0
Number of peaks
6989 (qval < 1E-05)

Base call quality data from DBCLS SRA