DRX025973
Illumina HiSeq 2500 sequencing of SAMD00024355

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Blood
Cell type
Granulocytic-monocytic progenitors
NA
NA

Attributes by original data submitter

Sample

sample_name
WT_GMP_H3K4me1

Sequenced DNA Library

library_name
WT_GMP_H3K4me1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
22977928
Reads aligned (%)
94.2
Duplicates removed (%)
9.7
Number of peaks
4435 (qval < 1E-05)

mm9

Number of total reads
22977928
Reads aligned (%)
94.1
Duplicates removed (%)
9.8
Number of peaks
4377 (qval < 1E-05)

Base call quality data from DBCLS SRA