DRX022433
Illumina HiSeq 1500 sequencing of SAMD00021088

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
HeLa-WT
strain
HeLa-S3
sex
female

Sequenced DNA Library

library_name
HeLa-S3 WT H3K27ac
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
48116624
Reads aligned (%)
99.2
Duplicates removed (%)
11.0
Number of peaks
26131 (qval < 1E-05)

hg19

Number of total reads
48116624
Reads aligned (%)
98.7
Duplicates removed (%)
12.1
Number of peaks
25990 (qval < 1E-05)

Base call quality data from DBCLS SRA