DRX021201
Illumina HiSeq 2000 sequencing of SAMD00019978

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
Embryonic head
NA
NA

Attributes by original data submitter

Sample

sample_name
Input head ChIP-Seq
strain
C57BL/6J
dev_stage
E11.5
sample_type
tissue sample
tissue_type
head

Sequenced DNA Library

library_name
Input_mouse_E11.5_head
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
64827848
Reads aligned (%)
95.5
Duplicates removed (%)
11.8
Number of peaks
754 (qval < 1E-05)

mm9

Number of total reads
64827848
Reads aligned (%)
95.2
Duplicates removed (%)
11.7
Number of peaks
861 (qval < 1E-05)

Base call quality data from DBCLS SRA