DRX021117
Illumina Genome Analyzer IIx sequencing of SAMD00020000

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

sample_name
293T MeTA input (-7-29-11)
cell_line
HEK293

Sequenced DNA Library

library_name
293T MeTA input (-8-1-11)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
38509127
Reads aligned (%)
58.2
Duplicates removed (%)
19.3
Number of peaks
310 (qval < 1E-05)

hg19

Number of total reads
38509127
Reads aligned (%)
57.7
Duplicates removed (%)
20.1
Number of peaks
600 (qval < 1E-05)

Base call quality data from DBCLS SRA