DRX021043
Illumina HiSeq 2500 sequencing of SAMD00019950

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Unclassified
Antigen
Unclassified

Cell type

Cell type Class
Blood
Cell type
K-562
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Chronic Myelogenous

Attributes by original data submitter

Sample

sample_name
HS5_no6_minus
cell_line
K562

Sequenced DNA Library

library_name
HS5_no6_minus
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
45609281
Reads aligned (%)
97.0
Duplicates removed (%)
5.2
Number of peaks
1160 (qval < 1E-05)

hg19

Number of total reads
45609281
Reads aligned (%)
96.0
Duplicates removed (%)
7.0
Number of peaks
1222 (qval < 1E-05)

Base call quality data from DBCLS SRA