DRX015423
RERF-LC-MS PolII [ChIPseq]

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Lung
Cell type
RERF-LC-MS
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma Non-Small Cell

Attributes by original data submitter

Sample

sample_name
DRS014913
sample comment
RERF-LC-MS lung adenocarcinoma cell lines; ChIPseq; anti-RNA Polymerase II (ab817 GR81285-2, abcam);

Sequenced DNA Library

library_name
RERF-LC-MS PolII [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
22610771
Reads aligned (%)
96.8
Duplicates removed (%)
16.4
Number of peaks
15961 (qval < 1E-05)

hg19

Number of total reads
22610771
Reads aligned (%)
95.8
Duplicates removed (%)
17.5
Number of peaks
15941 (qval < 1E-05)

Base call quality data from DBCLS SRA