DRX015402
RERF-LC-Ad1 H3K27me3 [ChIPseq]

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Lung
Cell type
RERF-LC-Ad1
Primary Tissue
Lung
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS014892
sample comment
RERF-LC-Ad1 lung adenocarcinoma cell lines; ChIPseq; anti-H3K27me3 (07-449 1999681, Millipore; ab6002 GR77445-10, abcam);

Sequenced DNA Library

library_name
RERF-LC-Ad1 H3K27me3 [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
14108448
Reads aligned (%)
96.2
Duplicates removed (%)
4.6
Number of peaks
293 (qval < 1E-05)

hg19

Number of total reads
14108448
Reads aligned (%)
95.7
Duplicates removed (%)
5.2
Number of peaks
319 (qval < 1E-05)

Base call quality data from DBCLS SRA