DRX015382
PC-7 H3K4me1 [ChIPseq]

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Lung
Cell type
PC-7
NA
NA

Attributes by original data submitter

Sample

sample_name
DRS014872
sample comment
PC-7 lung adenocarcinoma cell lines; ChIPseq; anti-H3K4me1 (ab8895 GR114297-1, abcam);

Sequenced DNA Library

library_name
PC-7 H3K4me1 [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
24952096
Reads aligned (%)
97.9
Duplicates removed (%)
3.3
Number of peaks
29994 (qval < 1E-05)

hg19

Number of total reads
24952096
Reads aligned (%)
97.7
Duplicates removed (%)
3.4
Number of peaks
30835 (qval < 1E-05)

Base call quality data from DBCLS SRA