DRX015375
PC-3 H3K27me3 [ChIPseq]

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Prostate
Cell type
PC-3
Primary Tissue
Prostate
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS014865
sample comment
PC-3 lung adenocarcinoma cell lines; ChIPseq; anti-H3K27me3 (07-449 1999681, Millipore; ab6002 GR77445-10, abcam);

Sequenced DNA Library

library_name
PC-3 H3K27me3 [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
27932370
Reads aligned (%)
95.1
Duplicates removed (%)
8.5
Number of peaks
1152 (qval < 1E-05)

hg19

Number of total reads
27932370
Reads aligned (%)
94.0
Duplicates removed (%)
10.2
Number of peaks
1196 (qval < 1E-05)

Base call quality data from DBCLS SRA