Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me1

Cell type

Cell type Class
Lung
Cell type
PC-14
Primary Tissue
Lung
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS014854
sample comment
PC-14 lung adenocarcinoma cell lines; ChIPseq; anti-H3K4me1 (ab8895 GR114297-1, abcam);

Sequenced DNA Library

library_name
PC-14 H3K4me1 [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg38

Number of total reads
31506084
Reads aligned (%)
97.2
Duplicates removed (%)
8.7
Number of peaks
31668 (qval < 1E-05)

hg19

Number of total reads
31506084
Reads aligned (%)
96.9
Duplicates removed (%)
9.0
Number of peaks
31525 (qval < 1E-05)

Base call quality data from DBCLS SRA