Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9me3

Cell type

Cell type Class
Lung
Cell type
II-18
Primary Tissue
Lung
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS014833
sample comment
II-18 lung adenocarcinoma cell lines; ChIPseq; anti-H3K9me3 (ab8898 GR111948-1, abcam);

Sequenced DNA Library

library_name
II-18 H3K9me3 [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

hg38

Number of total reads
22637966
Reads aligned (%)
93.7
Duplicates removed (%)
8.9
Number of peaks
4473 (qval < 1E-05)

hg19

Number of total reads
22637966
Reads aligned (%)
91.8
Duplicates removed (%)
13.4
Number of peaks
5342 (qval < 1E-05)

Base call quality data from DBCLS SRA