DRX015262
H1648 H3K9me3 [ChIPseq]

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K9me3

Cell type

Cell type Class
Lung
Cell type
NCI-H1648
Primary Tissue
Lung
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS014752
sample comment
H1648 lung adenocarcinoma cell lines; ChIPseq; anti-H3K9me3 (ab8898 GR111948-1, abcam);

Sequenced DNA Library

library_name
H1648 H3K9me3 [ChIPseq]
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
33096620
Reads aligned (%)
96.3
Duplicates removed (%)
4.0
Number of peaks
1403 (qval < 1E-05)

hg19

Number of total reads
33096620
Reads aligned (%)
94.8
Duplicates removed (%)
6.6
Number of peaks
1262 (qval < 1E-05)

Base call quality data from DBCLS SRA