Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Cardiovascular

Cell type

HMVEC

Primary Tissue

Blood Vessel

Tissue Diagnosis

Normal

Sample

sample_name

DRS014281

age

19

biomaterial_provider

Lonza Walkersville, Inc (Walkersville, MD)

biomaterial_type

Primary Cell

catalog number

FC-0077

cause of death

Anoxia,Asphyxiation

cell ontology

microvascular endothelial cell

cell ontology uri

http://purl.obolibrary.org/obo/CL_2000008

cell type abbreviation

HMVEC

cell_type

Human Cardiac Microvascular Endothelial Cells

collection_date

2013-03-01

donor_id

JTK011

ethnicity

African american

health_state

dead

ihec ref

JTK011

label

IHEC22

lot number

3234

sample_type

Primary Cell

sex

female

tissue_type

the endothelium of blood vessels

total cell count

260000

total cell count unit

cell per mili-liter

viability (tripan blue exclusion)

92%

Sequenced DNA Library

library_name

WadaLab-IHEC22-B1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Sequencing library was constructed following the Illumina protocol

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

47700598

Reads aligned (%)

98.1

Duplicates removed (%)

31.3

Number of peaks

29306 (qval < 1E-05)

hg19

Number of total reads

47700598

Reads aligned (%)

97.7

Duplicates removed (%)

32.0

Number of peaks

28933 (qval < 1E-05)