Antigen

Antigen Class

Unclassified

Antigen

Unclassified

Cell type

Cell type Class

Cardiovascular

Cell type

Coronary artery endothelial cells

NA

NA

Sample

sample_name

DRS014279

age

19

biomaterial_provider

Lonza Walkersville, Inc (Walkersville, MD)

biomaterial_type

Primary Cell

catalog number

FC-0077

cause of death

Anoxia

cell ontology

endothelial cell of coronary artery

cell ontology uri

http://purl.obolibrary.org/obo/CL_2000018

cell type abbreviation

HCAEC

cell_type

Human Coronary Artery Endothelial Cells

collection_date

2013-03-01

donor_id

JTK009

ethnicity

African american

health_state

dead

ihec ref

JTK009

label

IHEC20

lot number

3228

sample_type

Primary Cell

sex

female

tissue_type

the endothelium of blood vessels

total cell count

560000

total cell count unit

cell per mili-liter

viability (tripan blue exclusion)

97%

Sequenced DNA Library

library_name

WadaLab-IHEC20-E1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Sequencing library was constructed following the Illumina protocol

Sequencing Platform

instrument_model

Illumina HiSeq 2000

hg38

Number of total reads

41971155

Reads aligned (%)

98.4

Duplicates removed (%)

4.9

Number of peaks

2546 (qval < 1E-05)

hg19

Number of total reads

41971155

Reads aligned (%)

96.9

Duplicates removed (%)

7.9

Number of peaks

1856 (qval < 1E-05)