DRX013196
HeLa PolII

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
RNA polymerase
Antigen
RNA polymerase II

Cell type

Cell type Class
Uterus
Cell type
HeLa
Primary Tissue
Cervix
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS012995
sample comment
ChIP seq library. HeLa cell line, PolII IP

Sequenced DNA Library

library_name
HeLa PolII
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
186897451
Reads aligned (%)
92.5
Duplicates removed (%)
27.9
Number of peaks
5685 (qval < 1E-05)

hg19

Number of total reads
186897451
Reads aligned (%)
91.5
Duplicates removed (%)
29.9
Number of peaks
4545 (qval < 1E-05)

Base call quality data from DBCLS SRA