DRX013185
HEK293 H3K4me3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Kidney
Cell type
293
Primary Tissue
Kidney
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

sample_name
DRS012984
sample comment
ChIP seq library. HEK293 cell line, H3K4me3 IP

Sequenced DNA Library

library_name
HEK293 H3K4me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
30207334
Reads aligned (%)
93.8
Duplicates removed (%)
49.5
Number of peaks
18717 (qval < 1E-05)

hg19

Number of total reads
30207334
Reads aligned (%)
93.6
Duplicates removed (%)
49.9
Number of peaks
18667 (qval < 1E-05)

Base call quality data from DBCLS SRA