DRX013184
DLD1 WCE

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Digestive tract
Cell type
DLD-1
Primary Tissue
Colon
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS012983
sample comment
ChIP seq library. DLD-1 cell line, whole cell extract

Sequenced DNA Library

library_name
DLD1 WCE
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
42979661
Reads aligned (%)
57.0
Duplicates removed (%)
19.8
Number of peaks
2116 (qval < 1E-05)

hg19

Number of total reads
42979661
Reads aligned (%)
56.4
Duplicates removed (%)
20.7
Number of peaks
2802 (qval < 1E-05)

Base call quality data from DBCLS SRA