DRX013178
DLD1 H3K36me3

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K36me3

Cell type

Cell type Class
Digestive tract
Cell type
DLD-1
Primary Tissue
Colon
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

sample_name
DRS012977
sample comment
ChIP seq library. DLD-1 cell line, H3K36me3 IP

Sequenced DNA Library

library_name
DLD1 H3K36me3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
57679607
Reads aligned (%)
89.2
Duplicates removed (%)
22.3
Number of peaks
2889 (qval < 1E-05)

hg19

Number of total reads
57679607
Reads aligned (%)
88.8
Duplicates removed (%)
23.3
Number of peaks
2908 (qval < 1E-05)

Base call quality data from DBCLS SRA