ChIP-Atlas: DRX009174

Sample information curated by ChIP-Atlas

Antigen

Antigen Class: Unclassified
Antigen: Unclassified

Cell type

Cell type Class: Unclassified
Cell type: Unclassified
NA: NA

Attributes by original data submitter

Sample

sample_name: DRS009037
sample comment: 0.5% formaldehyde 5min fixation

Sequenced DNA Library

library_strategy: ChIP-Seq
library_source: GENOMIC
library_selection: ChIP

Sequencing Platform

instrument_model: Illumina HiSeq 1000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads: 38532576
Reads aligned (%): 99.1
Duplicates removed (%): 70.7
Number of peaks: 295 (qval < 1E-05)

mm9

Number of total reads: 38532576
Reads aligned (%): 98.9
Duplicates removed (%): 70.8
Number of peaks: 289 (qval < 1E-05)

Base call quality data from DBCLS SRA